Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 PHGDH-209ENST00000641074 1780 ntBASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 KRASP1-201ENST00000407852 552 ntBASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 KRT17P3-201ENST00000420566 1262 ntBASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 AC069544.1-201ENST00000609399 999 ntBASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 AC007326.2-201ENST00000624224 7579 ntBASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SND1-IT1Q9HBX3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AC239809.2-201ENST00000415381 517 ntBASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AC004980.1-204ENST00000429707 299 ntBASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AC091390.4-202ENST00000476426 537 ntBASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 GXYLT1P5-201ENST00000614548 1189 ntBASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 KRT18P55-202ENST00000578578 1546 ntBASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
SND1-IT1Q9HBX3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms