Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.01■□□□□ 0.47
VPS11Q9H270 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.01■□□□□ 0.47
VPS11Q9H270 AP000525.1-201ENST00000608286 694 ntBASIC18.01■□□□□ 0.47
VPS11Q9H270 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 AC133963.1-201ENST00000504166 1679 ntBASIC18.01■□□□□ 0.47
VPS11Q9H270 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
VPS11Q9H270 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS11Q9H270 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
VPS11Q9H270 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18■□□□□ 0.47
VPS11Q9H270 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18■□□□□ 0.47
VPS11Q9H270 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18■□□□□ 0.47
VPS11Q9H270 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18■□□□□ 0.47
VPS11Q9H270 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
VPS11Q9H270 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18■□□□□ 0.47
VPS11Q9H270 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18■□□□□ 0.47
VPS11Q9H270 USP36-216ENST00000589424 970 ntTSL 5 BASIC18■□□□□ 0.47
VPS11Q9H270 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18■□□□□ 0.47
VPS11Q9H270 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VPS11Q9H270 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18■□□□□ 0.47
VPS11Q9H270 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VPS11Q9H270 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VPS11Q9H270 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18■□□□□ 0.47
VPS11Q9H270 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VPS11Q9H270 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS11Q9H270 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VPS11Q9H270 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 TSPY7P-201ENST00000431358 1114 ntBASIC17.99■□□□□ 0.47
VPS11Q9H270 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS11Q9H270 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS11Q9H270 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
VPS11Q9H270 AC116562.4-202ENST00000641738 218 ntBASIC17.99■□□□□ 0.47
VPS11Q9H270 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS11Q9H270 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS11Q9H270 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS11Q9H270 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VPS11Q9H270 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS11Q9H270 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 AC007663.1-201ENST00000438948 1240 ntBASIC17.98■□□□□ 0.47
VPS11Q9H270 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS11Q9H270 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS11Q9H270 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.98■□□□□ 0.47
VPS11Q9H270 MIR3180-4-201ENST00000582223 153 ntBASIC17.98■□□□□ 0.47
VPS11Q9H270 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS11Q9H270 AC010240.3-201ENST00000607688 395 ntBASIC17.98■□□□□ 0.47
VPS11Q9H270 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS11Q9H270 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
VPS11Q9H270 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS11Q9H270 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS11Q9H270 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS11Q9H270 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS11Q9H270 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS11Q9H270 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
VPS11Q9H270 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms