Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 KLF4P1-201ENST00000412782 1185 ntBASIC18.97■□□□□ 0.63
CASD1Q96PB1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 AIRN-201ENST00000601203 4374 ntBASIC18.96■□□□□ 0.63
CASD1Q96PB1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 RPS8P6-201ENST00000426177 609 ntBASIC18.96■□□□□ 0.63
CASD1Q96PB1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 AC109462.3-201ENST00000573934 613 ntBASIC18.96■□□□□ 0.63
CASD1Q96PB1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 MTDHP5-201ENST00000598980 586 ntBASIC18.96■□□□□ 0.63
CASD1Q96PB1 WIZP1-201ENST00000531444 2299 ntBASIC18.96■□□□□ 0.63
CASD1Q96PB1 NCF1C-201ENST00000438382 1427 ntBASIC18.96■□□□□ 0.63
CASD1Q96PB1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.96■□□□□ 0.63
CASD1Q96PB1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASD1Q96PB1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.62
CASD1Q96PB1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 AC003669.1-201ENST00000334569 611 ntBASIC18.95■□□□□ 0.62
CASD1Q96PB1 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 AC004967.1-201ENST00000453589 447 ntBASIC18.95■□□□□ 0.62
CASD1Q96PB1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.95■□□□□ 0.62
CASD1Q96PB1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 AC134684.3-201ENST00000641758 218 ntBASIC18.95■□□□□ 0.62
CASD1Q96PB1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.95■□□□□ 0.62
CASD1Q96PB1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASD1Q96PB1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 AC018445.3-201ENST00000624177 1945 ntBASIC18.94■□□□□ 0.62
CASD1Q96PB1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 AC135776.1-201ENST00000319817 2481 ntBASIC18.94■□□□□ 0.62
CASD1Q96PB1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASD1Q96PB1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.94■□□□□ 0.62
CASD1Q96PB1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms