Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 FLJ13224-201ENST00000313737 1514 ntBASIC18.87■□□□□ 0.61
SUSD3Q96L08 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 SLC25A1P1-201ENST00000528351 927 ntBASIC18.87■□□□□ 0.61
SUSD3Q96L08 AL020996.1-203ENST00000536896 2307 ntBASIC18.87■□□□□ 0.61
SUSD3Q96L08 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 AC116407.3-201ENST00000623905 1129 ntBASIC18.87■□□□□ 0.61
SUSD3Q96L08 AC073592.5-201ENST00000624854 528 ntBASIC18.87■□□□□ 0.61
SUSD3Q96L08 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SUSD3Q96L08 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUSD3Q96L08 AC104581.1-202ENST00000635932 2618 ntBASIC18.87■□□□□ 0.61
SUSD3Q96L08 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 BX276092.7-203ENST00000637198 1536 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 SPDYE21P-201ENST00000413323 827 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 PRYP5-201ENST00000451909 266 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 BX005266.1-201ENST00000473402 457 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 AL022326.1-202ENST00000641533 845 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 AC107918.4-202ENST00000641623 219 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 AF228730.7-201ENST00000641842 219 ntBASIC18.86■□□□□ 0.61
SUSD3Q96L08 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
SUSD3Q96L08 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUSD3Q96L08 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 KRT18P55-202ENST00000578578 1546 ntBASIC18.85■□□□□ 0.61
SUSD3Q96L08 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 AL671883.3-201ENST00000603274 991 ntBASIC18.85■□□□□ 0.61
SUSD3Q96L08 AC019129.2-201ENST00000609837 1235 ntBASIC18.85■□□□□ 0.61
SUSD3Q96L08 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.85■□□□□ 0.61
SUSD3Q96L08 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 HLA-J-201ENST00000462773 1622 ntBASIC18.85■□□□□ 0.61
SUSD3Q96L08 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUSD3Q96L08 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms