Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 LIN28AP1-201ENST00000429574 405 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 ATP5G1P1-201ENST00000448724 379 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 AC110760.3-202ENST00000515177 371 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 KRT18P21-201ENST00000515767 1272 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 AC007423.1-201ENST00000605009 627 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 AC008993.2-201ENST00000631744 806 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 AC124067.4-201ENST00000519691 2379 ntBASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MS4A3Q96HJ5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 HEIH-201ENST00000623091 1652 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 AC093536.2-201ENST00000565257 1406 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 RCN1P1-201ENST00000400413 996 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 RPS14P4-201ENST00000415880 418 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 USP9YP14-201ENST00000430663 563 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 CR769767.2-201ENST00000622735 460 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 AC083906.6-201ENST00000641366 219 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 AC068587.9-201ENST00000641814 219 ntBASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A3Q96HJ5 ESPNP-201ENST00000270691 2015 ntBASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms