Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 AC083880.1-201ENST00000608266 535 ntBASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 AC080038.1-201ENST00000611274 1154 ntBASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 CROCCP1-201ENST00000426910 5675 ntBASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 KRT16P5-201ENST00000455284 522 ntBASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 AC132938.6-201ENST00000623828 1655 ntBASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 LINC02199-201ENST00000506655 2702 ntBASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM4Q8WVI0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 AC026691.1-201ENST00000602502 2017 ntBASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 NIFKP9-201ENST00000419265 221 ntBASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 AC083906.2-201ENST00000511578 360 ntBASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.27■□□□□ 0.04
SMIM4Q8WVI0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 REXO1L11P-201ENST00000620964 1927 ntBASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 AL596257.1-201ENST00000641463 2694 ntBASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM4Q8WVI0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms