Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 MIR770-201ENST00000390219 98 ntBASIC21.6■■□□□ 1.05
SNED1Q8TER0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 TSEN15P1-201ENST00000423257 515 ntBASIC21.6■■□□□ 1.05
SNED1Q8TER0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 CEND1P1-201ENST00000451006 455 ntBASIC21.6■■□□□ 1.05
SNED1Q8TER0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 DUTP2-201ENST00000519164 463 ntBASIC21.6■■□□□ 1.05
SNED1Q8TER0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 AC096734.2-201ENST00000562054 433 ntBASIC21.59■■□□□ 1.05
SNED1Q8TER0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 AL513210.1-201ENST00000629608 234 ntBASIC21.59■■□□□ 1.05
SNED1Q8TER0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SNED1Q8TER0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNED1Q8TER0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
SNED1Q8TER0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 ADH5P3-201ENST00000433842 1137 ntBASIC21.58■■□□□ 1.05
SNED1Q8TER0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.58■■□□□ 1.05
SNED1Q8TER0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.58■■□□□ 1.05
SNED1Q8TER0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.58■■□□□ 1.05
SNED1Q8TER0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.58■■□□□ 1.05
SNED1Q8TER0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.58■■□□□ 1.05
SNED1Q8TER0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNED1Q8TER0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNED1Q8TER0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNED1Q8TER0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.58■■□□□ 1.04
SNED1Q8TER0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNED1Q8TER0 PHGDH-209ENST00000641074 1780 ntBASIC21.58■■□□□ 1.04
SNED1Q8TER0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SNED1Q8TER0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.58■■□□□ 1.04
SNED1Q8TER0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 AC003669.1-201ENST00000334569 611 ntBASIC21.57■■□□□ 1.04
SNED1Q8TER0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 BCRP1-201ENST00000444246 691 ntBASIC21.57■■□□□ 1.04
SNED1Q8TER0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 AC004877.2-201ENST00000623941 599 ntBASIC21.57■■□□□ 1.04
SNED1Q8TER0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.57■■□□□ 1.04
SNED1Q8TER0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNED1Q8TER0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms