Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AL049812.1-201ENST00000432563 2267 ntBASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 PTCHD3P3-201ENST00000403073 906 ntBASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AC006116.8-202ENST00000587620 1550 ntBASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 LINC00982-205ENST00000420957 435 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 FAM185BP-201ENST00000443595 716 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 TFAMP1-201ENST00000412727 736 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 BASP1P1-201ENST00000430708 665 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 CRB3P1-201ENST00000449338 276 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 LINC02560-201ENST00000596379 459 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 AC025678.2-201ENST00000562061 970 ntBASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ALMS1Q8TCU4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ALMS1Q8TCU4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms