Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AL645929.1-201ENST00000420084 975 ntBASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDH19Q8TAB3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
PCDH19Q8TAB3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 MTCL1P1-201ENST00000446207 792 ntBASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 AC005332.1-201ENST00000577698 1310 ntBASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 PP12613-201ENST00000424958 2230 ntBASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH19Q8TAB3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 AC116407.2-201ENST00000613639 860 ntBASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 AC138932.1-201ENST00000534164 6830 ntBASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH19Q8TAB3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 AL136038.3-201ENST00000561909 1096 ntBASIC18.43■□□□□ 0.54
PCDH19Q8TAB3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms