Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 KRT8P47-201ENST00000604727 1398 ntBASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 AC100803.2-201ENST00000562459 1963 ntBASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 DRAXINP1-201ENST00000437611 948 ntBASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 AP002383.4-201ENST00000442518 975 ntBASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC148Q8NFR7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 LTB4R2-202ENST00000528054 3092 ntBASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 NPAP1P7-201ENST00000613027 823 ntBASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 AC093458.2-201ENST00000623150 629 ntBASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC148Q8NFR7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 TPSP2-201ENST00000561760 610 ntBASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC148Q8NFR7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms