Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF248Q8NDW4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 ABCD1P5-201ENST00000445663 754 ntBASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 AC002347.1-201ENST00000569543 541 ntBASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 AC068587.9-201ENST00000641814 219 ntBASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ZNF248Q8NDW4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AL163051.1-201ENST00000569214 1512 ntBASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AC004832.2-201ENST00000426397 482 ntBASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AC011467.2-201ENST00000598425 242 ntBASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 AC008735.5-201ENST00000623544 497 ntBASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF248Q8NDW4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 AC068472.1-201ENST00000474589 881 ntBASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 AL139288.1-201ENST00000623748 933 ntBASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
ZNF248Q8NDW4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms