Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AC004790.2-201ENST00000623588 572 ntBASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AL596325.1-201ENST00000563991 1082 ntBASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AL606495.2-201ENST00000605867 535 ntBASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AC009093.7-201ENST00000623853 1223 ntBASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC168Q8NDH2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 AL512356.2-201ENST00000546955 174 ntBASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 AP001059.3-201ENST00000619053 235 ntBASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 MIR6799-201ENST00000620297 69 ntBASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 AC023141.13-201ENST00000604991 943 ntBASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 AC008667.4-201ENST00000607370 168 ntBASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC168Q8NDH2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC168Q8NDH2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.83□□□□□ -0.03
CCDC168Q8NDH2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC168Q8NDH2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC168Q8NDH2 AC010460.3-201ENST00000511359 1579 ntBASIC14.83□□□□□ -0.03
CCDC168Q8NDH2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC168Q8NDH2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 FAM58DP-201ENST00000428076 619 ntBASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms