Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 AL035633.1-201ENST00000406139 838 ntBASIC18.27■□□□□ 0.52
SIX5Q8N196 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX5Q8N196 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX5Q8N196 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 AC004817.3-201ENST00000602957 2129 ntBASIC18.27■□□□□ 0.52
SIX5Q8N196 C20orf181-201ENST00000623918 480 ntBASIC18.27■□□□□ 0.52
SIX5Q8N196 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX5Q8N196 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.27■□□□□ 0.51
SIX5Q8N196 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIX5Q8N196 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIX5Q8N196 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIX5Q8N196 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.26■□□□□ 0.51
SIX5Q8N196 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX5Q8N196 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX5Q8N196 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 LTB4R2-202ENST00000528054 3092 ntBASIC18.26■□□□□ 0.51
SIX5Q8N196 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX5Q8N196 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX5Q8N196 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX5Q8N196 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SIX5Q8N196 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX5Q8N196 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX5Q8N196 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX5Q8N196 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX5Q8N196 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX5Q8N196 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SIX5Q8N196 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX5Q8N196 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SIX5Q8N196 MYLKP1-201ENST00000509077 1580 ntBASIC18.25■□□□□ 0.51
SIX5Q8N196 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.25■□□□□ 0.51
SIX5Q8N196 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.25■□□□□ 0.51
SIX5Q8N196 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX5Q8N196 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.25■□□□□ 0.51
SIX5Q8N196 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX5Q8N196 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.25■□□□□ 0.51
SIX5Q8N196 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX5Q8N196 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIX5Q8N196 CRYGEP-201ENST00000412192 528 ntBASIC18.25■□□□□ 0.51
SIX5Q8N196 AC244107.1-201ENST00000442033 332 ntBASIC18.25■□□□□ 0.51
SIX5Q8N196 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.25■□□□□ 0.51
SIX5Q8N196 AC239800.4-201ENST00000603712 296 ntBASIC18.25■□□□□ 0.51
SIX5Q8N196 AL078644.1-201ENST00000609881 752 ntBASIC18.25■□□□□ 0.51
SIX5Q8N196 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.25■□□□□ 0.51
SIX5Q8N196 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SIX5Q8N196 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIX5Q8N196 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIX5Q8N196 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SIX5Q8N196 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SIX5Q8N196 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.24■□□□□ 0.51
SIX5Q8N196 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX5Q8N196 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.24■□□□□ 0.51
SIX5Q8N196 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.24■□□□□ 0.51
SIX5Q8N196 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.24■□□□□ 0.51
SIX5Q8N196 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX5Q8N196 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX5Q8N196 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX5Q8N196 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.24■□□□□ 0.51
SIX5Q8N196 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms