Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AC068137.2-201ENST00000605408 478 ntBASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AC079781.4-201ENST00000641908 219 ntBASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AL353135.1-201ENST00000606729 504 ntBASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AC092902.6-201ENST00000641783 218 ntBASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 KRT18P28-201ENST00000453838 1332 ntBASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.69■□□□□ 0.26
COL27A1Q8IZC6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL27A1Q8IZC6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 AC091812.2-201ENST00000619081 385 ntBASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms