Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 LINC01126-201ENST00000623515 1646 ntBASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 AP000692.2-201ENST00000608391 879 ntBASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM42Q8IWZ5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 CROCCP2-202ENST00000412962 2773 ntBASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 B3GAT3P1-201ENST00000471720 806 ntBASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AC011506.1-201ENST00000474329 610 ntBASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM42Q8IWZ5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 MIR718-201ENST00000390190 70 ntBASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms