Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 DUTP2-201ENST00000519164 463 ntBASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 AC005363.2-201ENST00000618631 242 ntBASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 AC079602.3-201ENST00000623931 403 ntBASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 AC113347.1-201ENST00000413321 391 ntBASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SPDYE15P-201ENST00000424157 909 ntBASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 AL137013.1-201ENST00000432946 1228 ntBASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 AL136038.4-201ENST00000603606 1261 ntBASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 AC139887.4-201ENST00000607877 719 ntBASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00346Q8IVM7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 TERF1P1-201ENST00000311003 1181 ntBASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 AC024563.2-201ENST00000603282 481 ntBASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 AL355312.1-201ENST00000407115 2176 ntBASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 AL391807.1-203ENST00000604392 2365 ntBASIC15.84■□□□□ 0.13
LINC00346Q8IVM7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms