Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.35□□□□□ -0.43
CSMD3Q7Z407 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AF228730.6-201ENST00000641497 218 ntBASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC084121.3-201ENST00000641716 218 ntBASIC12.35□□□□□ -0.43
CSMD3Q7Z407 AC105233.6-201ENST00000642093 218 ntBASIC12.35□□□□□ -0.43
CSMD3Q7Z407 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD3Q7Z407 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 CRYGEP-201ENST00000412192 528 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 MRPS18AP1-201ENST00000414458 589 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 FAM58DP-201ENST00000428076 619 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AC008687.5-201ENST00000593746 558 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AC004461.1-201ENST00000412461 403 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 MYLKP1-201ENST00000509077 1580 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD3Q7Z407 AC004790.2-201ENST00000623588 572 ntBASIC12.34□□□□□ -0.43
CSMD3Q7Z407 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CSMD3Q7Z407 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CSMD3Q7Z407 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CSMD3Q7Z407 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.33□□□□□ -0.43
CSMD3Q7Z407 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 AC015922.1-201ENST00000421102 1152 ntBASIC12.33□□□□□ -0.44
CSMD3Q7Z407 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 AC073592.5-201ENST00000624854 528 ntBASIC12.33□□□□□ -0.44
CSMD3Q7Z407 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 BCAR1-209ENST00000546196 1340 ntBASIC12.33□□□□□ -0.44
CSMD3Q7Z407 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
CSMD3Q7Z407 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms