Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 ABALON-201ENST00000629058 1903 ntBASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 KRT17P6-201ENST00000453795 1220 ntBASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 FOSL1P1-201ENST00000511041 816 ntBASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 AC009154.2-201ENST00000621177 724 ntBASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 AC093677.2-201ENST00000600169 1863 ntBASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFWD3Q6PCD5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 AL450487.1-201ENST00000426799 995 ntBASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 AL096828.2-201ENST00000567259 1965 ntBASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
RFWD3Q6PCD5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 AC009053.2-201ENST00000563701 2365 ntBASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 IGHV3-47-201ENST00000425060 335 ntBASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 MTCL1P1-201ENST00000446207 792 ntBASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 VENTXP7-201ENST00000475503 772 ntBASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 AC099336.1-202ENST00000602961 463 ntBASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 AC138894.3-201ENST00000603787 634 ntBASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD3Q6PCD5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms