Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 AP006294.2-201ENST00000641667 209 ntBASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6AP1LQ52LC2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 NAPSB-206ENST00000562112 1266 ntBASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 NEK4P2-201ENST00000580004 1012 ntBASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 MIR3917-201ENST00000580971 93 ntBASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 AC106820.2-201ENST00000563775 3264 ntBASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
ATP6AP1LQ52LC2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 AL138688.1-201ENST00000624851 1594 ntBASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6AP1LQ52LC2 CROCCP1-201ENST00000426910 5675 ntBASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms