Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 ARMC10P1-201ENST00000313754 855 ntBASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PCGF3Q3KNV8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 KRT18P35-201ENST00000510488 1269 ntBASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AL445228.2-201ENST00000605589 952 ntBASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AC112497.1-201ENST00000624824 639 ntBASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AC124067.4-201ENST00000519691 2379 ntBASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 AC084018.2-201ENST00000613093 2607 ntBASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCGF3Q3KNV8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 MIR564-202ENST00000385049 94 ntBASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 AL441883.1-201ENST00000566170 1045 ntBASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 AC087388.1-201ENST00000571370 1112 ntBASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 NTF6B-201ENST00000591913 560 ntBASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.86■□□□□ 0.13
PCGF3Q3KNV8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PCGF3Q3KNV8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms