Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC104076.2-201ENST00000448912 469 ntBASIC16.01■□□□□ 0.15
CLRN1P58418 AP003733.1-201ENST00000491725 852 ntBASIC16.01■□□□□ 0.15
CLRN1P58418 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.01■□□□□ 0.15
CLRN1P58418 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.01■□□□□ 0.15
CLRN1P58418 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.01■□□□□ 0.15
CLRN1P58418 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.01■□□□□ 0.15
CLRN1P58418 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.01■□□□□ 0.15
CLRN1P58418 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.01■□□□□ 0.15
CLRN1P58418 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.01■□□□□ 0.15
CLRN1P58418 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLRN1P58418 LINC01311-201ENST00000565162 1445 ntBASIC16.01■□□□□ 0.15
CLRN1P58418 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.01■□□□□ 0.15
CLRN1P58418 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CLRN1P58418 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16■□□□□ 0.15
CLRN1P58418 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16■□□□□ 0.15
CLRN1P58418 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16■□□□□ 0.15
CLRN1P58418 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16■□□□□ 0.15
CLRN1P58418 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLRN1P58418 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16■□□□□ 0.15
CLRN1P58418 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16■□□□□ 0.15
CLRN1P58418 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLRN1P58418 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
CLRN1P58418 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16■□□□□ 0.15
CLRN1P58418 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16■□□□□ 0.15
CLRN1P58418 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLRN1P58418 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.99■□□□□ 0.15
CLRN1P58418 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 HBZP1-201ENST00000354915 429 ntBASIC15.99■□□□□ 0.15
CLRN1P58418 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.99■□□□□ 0.15
CLRN1P58418 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.99■□□□□ 0.15
CLRN1P58418 AC063952.2-201ENST00000498792 1227 ntBASIC15.99■□□□□ 0.15
CLRN1P58418 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.99■□□□□ 0.15
CLRN1P58418 AC022616.7-201ENST00000525383 220 ntBASIC15.99■□□□□ 0.15
CLRN1P58418 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.99■□□□□ 0.15
CLRN1P58418 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.99■□□□□ 0.15
CLRN1P58418 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLRN1P58418 AC004263.2-201ENST00000617183 678 ntBASIC15.99■□□□□ 0.15
CLRN1P58418 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.99■□□□□ 0.15
CLRN1P58418 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLRN1P58418 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLRN1P58418 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.99■□□□□ 0.15
CLRN1P58418 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms