Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.05■□□□□ 0.32
GFERP55789 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.05■□□□□ 0.32
GFERP55789 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.05■□□□□ 0.32
GFERP55789 AL139288.1-201ENST00000623748 933 ntBASIC17.05■□□□□ 0.32
GFERP55789 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 AF228730.7-201ENST00000641842 219 ntBASIC17.05■□□□□ 0.32
GFERP55789 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.05■□□□□ 0.32
GFERP55789 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GFERP55789 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.05■□□□□ 0.32
GFERP55789 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GFERP55789 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.05■□□□□ 0.32
GFERP55789 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GFERP55789 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GFERP55789 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFERP55789 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.05■□□□□ 0.32
GFERP55789 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GFERP55789 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 AC122714.2-201ENST00000502787 707 ntBASIC17.04■□□□□ 0.32
GFERP55789 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.04■□□□□ 0.32
GFERP55789 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GFERP55789 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 AL671883.3-201ENST00000603274 991 ntBASIC17.04■□□□□ 0.32
GFERP55789 AC025062.2-201ENST00000605477 670 ntBASIC17.04■□□□□ 0.32
GFERP55789 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.04■□□□□ 0.32
GFERP55789 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.04■□□□□ 0.32
GFERP55789 SIRPAP1-201ENST00000448467 1770 ntBASIC17.04■□□□□ 0.32
GFERP55789 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GFERP55789 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.04■□□□□ 0.32
GFERP55789 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
GFERP55789 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFERP55789 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
GFERP55789 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GFERP55789 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
GFERP55789 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.03■□□□□ 0.32
GFERP55789 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.03■□□□□ 0.32
GFERP55789 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 BX005266.1-201ENST00000473402 457 ntBASIC17.03■□□□□ 0.32
GFERP55789 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.03■□□□□ 0.32
GFERP55789 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.03■□□□□ 0.32
GFERP55789 AC139887.3-201ENST00000568585 713 ntBASIC17.03■□□□□ 0.32
GFERP55789 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
GFERP55789 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.03■□□□□ 0.32
GFERP55789 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GFERP55789 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.03■□□□□ 0.32
GFERP55789 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GFERP55789 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GFERP55789 AP000997.3-201ENST00000623333 2250 ntBASIC17.03■□□□□ 0.32
GFERP55789 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GFERP55789 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.03■□□□□ 0.32
GFERP55789 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 PMPCAP1-201ENST00000508114 1576 ntBASIC17.02■□□□□ 0.32
GFERP55789 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.02■□□□□ 0.32
GFERP55789 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GFERP55789 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.02■□□□□ 0.32
GFERP55789 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GFERP55789 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.02■□□□□ 0.32
GFERP55789 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFERP55789 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.02■□□□□ 0.32
GFERP55789 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GFERP55789 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms