Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 GPAT2P1-201ENST00000444924 1672 ntBASIC16.41■□□□□ 0.22
CDH11P55287 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.41■□□□□ 0.22
CDH11P55287 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CDH11P55287 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH11P55287 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH11P55287 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDH11P55287 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 AC141586.5-201ENST00000624546 2050 ntBASIC16.41■□□□□ 0.22
CDH11P55287 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDH11P55287 AC080080.1-201ENST00000625121 2420 ntBASIC16.4■□□□□ 0.22
CDH11P55287 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 AC106820.2-201ENST00000563775 3264 ntBASIC16.4■□□□□ 0.22
CDH11P55287 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH11P55287 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 RNF152P1-201ENST00000397754 604 ntBASIC16.4■□□□□ 0.22
CDH11P55287 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH11P55287 YBX1P2-201ENST00000489612 999 ntBASIC16.4■□□□□ 0.22
CDH11P55287 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH11P55287 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 AC009102.3-201ENST00000623118 1491 ntBASIC16.4■□□□□ 0.22
CDH11P55287 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH11P55287 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH11P55287 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 KRT18P55-202ENST00000578578 1546 ntBASIC16.4■□□□□ 0.22
CDH11P55287 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH11P55287 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CDH11P55287 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CDH11P55287 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.39■□□□□ 0.22
CDH11P55287 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 AC099398.1-201ENST00000567919 2776 ntBASIC16.39■□□□□ 0.21
CDH11P55287 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH11P55287 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 AC063952.2-201ENST00000498792 1227 ntBASIC16.39■□□□□ 0.21
CDH11P55287 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CDH11P55287 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH11P55287 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH11P55287 SDHAP2-201ENST00000455183 2001 ntBASIC16.39■□□□□ 0.21
CDH11P55287 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH11P55287 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms