Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PDE1AP54750 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
PDE1AP54750 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE1AP54750 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE1AP54750 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PDE1AP54750 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
PDE1AP54750 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE1AP54750 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE1AP54750 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE1AP54750 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE1AP54750 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE1AP54750 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE1AP54750 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PDE1AP54750 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 GUSBP12-201ENST00000513727 720 ntBASIC21.81■■□□□ 1.08
PDE1AP54750 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.81■■□□□ 1.08
PDE1AP54750 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.81■■□□□ 1.08
PDE1AP54750 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.81■■□□□ 1.08
PDE1AP54750 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.81■■□□□ 1.08
PDE1AP54750 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
PDE1AP54750 AL592071.1-201ENST00000611956 408 ntBASIC21.81■■□□□ 1.08
PDE1AP54750 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE1AP54750 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE1AP54750 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PDE1AP54750 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE1AP54750 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDE1AP54750 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 AC096633.1-201ENST00000422446 749 ntBASIC21.8■■□□□ 1.08
PDE1AP54750 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.8■■□□□ 1.08
PDE1AP54750 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE1AP54750 AC124864.1-201ENST00000623408 392 ntBASIC21.8■■□□□ 1.08
PDE1AP54750 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE1AP54750 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE1AP54750 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE1AP54750 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE1AP54750 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDE1AP54750 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.79■■□□□ 1.08
PDE1AP54750 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.79■■□□□ 1.08
PDE1AP54750 AC016734.2-201ENST00000624325 1377 ntBASIC21.79■■□□□ 1.08
PDE1AP54750 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
PDE1AP54750 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.79■■□□□ 1.08
PDE1AP54750 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.79■■□□□ 1.08
PDE1AP54750 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 AC087388.1-201ENST00000571370 1112 ntBASIC21.79■■□□□ 1.08
PDE1AP54750 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.79■■□□□ 1.08
PDE1AP54750 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDE1AP54750 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE1AP54750 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.78■■□□□ 1.08
PDE1AP54750 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 HLA-J-201ENST00000462773 1622 ntBASIC21.78■■□□□ 1.08
PDE1AP54750 AC139713.2-201ENST00000641328 2723 ntBASIC21.78■■□□□ 1.08
PDE1AP54750 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 PCED1CP-201ENST00000419887 785 ntBASIC21.78■■□□□ 1.08
PDE1AP54750 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PDE1AP54750 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 AC090616.6-201ENST00000582640 721 ntBASIC21.78■■□□□ 1.08
PDE1AP54750 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PDE1AP54750 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PDE1AP54750 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.78■■□□□ 1.08
PDE1AP54750 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PDE1AP54750 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms