Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ZNF140P52738 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF140P52738 AC246785.2-201ENST00000432512 513 ntBASIC17.78■□□□□ 0.44
ZNF140P52738 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 AC091607.1-201ENST00000490318 1060 ntBASIC17.78■□□□□ 0.44
ZNF140P52738 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF140P52738 AC091076.1-201ENST00000610741 619 ntBASIC17.78■□□□□ 0.44
ZNF140P52738 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
ZNF140P52738 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF140P52738 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNF140P52738 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
ZNF140P52738 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF140P52738 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF140P52738 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF140P52738 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
ZNF140P52738 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ZNF140P52738 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNF140P52738 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF140P52738 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF140P52738 AC011840.4-201ENST00000578471 627 ntBASIC17.77■□□□□ 0.44
ZNF140P52738 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.77■□□□□ 0.44
ZNF140P52738 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ZNF140P52738 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF140P52738 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
ZNF140P52738 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF140P52738 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF140P52738 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF140P52738 AC133963.1-201ENST00000504166 1679 ntBASIC17.77■□□□□ 0.43
ZNF140P52738 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF140P52738 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 AC097374.2-201ENST00000618617 1306 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF140P52738 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF140P52738 AC010460.3-201ENST00000511359 1579 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 AC125634.1-201ENST00000438758 1403 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.76■□□□□ 0.43
ZNF140P52738 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.76■□□□□ 0.43
ZNF140P52738 TPSP2-201ENST00000561760 610 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 AP005901.3-202ENST00000581653 237 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.76■□□□□ 0.43
ZNF140P52738 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF140P52738 AL138831.2-201ENST00000606564 490 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZNF140P52738 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF140P52738 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF140P52738 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 BX276092.7-203ENST00000637198 1536 ntBASIC17.76■□□□□ 0.43
ZNF140P52738 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF140P52738 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF140P52738 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 KRT18P1-202ENST00000452408 1331 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms