Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.86■□□□□ 0.77
BRCA2P51587 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCA2P51587 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCA2P51587 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BRCA2P51587 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 AL121761.2-201ENST00000598007 1648 ntBASIC19.85■□□□□ 0.77
BRCA2P51587 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.85■□□□□ 0.77
BRCA2P51587 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
BRCA2P51587 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.85■□□□□ 0.77
BRCA2P51587 AC025678.2-201ENST00000562061 970 ntBASIC19.85■□□□□ 0.77
BRCA2P51587 AC009093.7-201ENST00000623853 1223 ntBASIC19.85■□□□□ 0.77
BRCA2P51587 NCF1C-201ENST00000438382 1427 ntBASIC19.85■□□□□ 0.77
BRCA2P51587 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BRCA2P51587 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.85■□□□□ 0.77
BRCA2P51587 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
BRCA2P51587 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
BRCA2P51587 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCA2P51587 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 KRT18P65-201ENST00000439811 1286 ntBASIC19.84■□□□□ 0.77
BRCA2P51587 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.84■□□□□ 0.77
BRCA2P51587 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.84■□□□□ 0.77
BRCA2P51587 AC025048.6-201ENST00000634326 1161 ntBASIC19.84■□□□□ 0.77
BRCA2P51587 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
BRCA2P51587 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCA2P51587 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCA2P51587 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.84■□□□□ 0.77
BRCA2P51587 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
BRCA2P51587 AL627223.1-201ENST00000416693 442 ntBASIC19.83■□□□□ 0.77
BRCA2P51587 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.83■□□□□ 0.77
BRCA2P51587 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.83■□□□□ 0.77
BRCA2P51587 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.83■□□□□ 0.77
BRCA2P51587 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.83■□□□□ 0.77
BRCA2P51587 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
BRCA2P51587 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.83■□□□□ 0.77
BRCA2P51587 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.83■□□□□ 0.77
BRCA2P51587 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.83■□□□□ 0.77
BRCA2P51587 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCA2P51587 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BRCA2P51587 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRCA2P51587 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRCA2P51587 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
BRCA2P51587 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.83■□□□□ 0.76
BRCA2P51587 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BRCA2P51587 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
BRCA2P51587 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BRCA2P51587 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 FAM58DP-201ENST00000428076 619 ntBASIC19.82■□□□□ 0.76
BRCA2P51587 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.82■□□□□ 0.76
BRCA2P51587 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 ESPNP-201ENST00000270691 2015 ntBASIC19.82■□□□□ 0.76
BRCA2P51587 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 TFAMP1-201ENST00000412727 736 ntBASIC19.82■□□□□ 0.76
BRCA2P51587 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.82■□□□□ 0.76
BRCA2P51587 AC055876.3-201ENST00000431496 288 ntBASIC19.82■□□□□ 0.76
BRCA2P51587 TSPY16P-201ENST00000449843 468 ntBASIC19.82■□□□□ 0.76
BRCA2P51587 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms