Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA2P51531 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA2P51531 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
SMARCA2P51531 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
SMARCA2P51531 AC093214.1-201ENST00000511688 1107 ntBASIC31.49■■■□□ 2.63
SMARCA2P51531 AC051619.7-201ENST00000568314 623 ntBASIC31.49■■■□□ 2.63
SMARCA2P51531 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA2P51531 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC31.49■■■□□ 2.63
SMARCA2P51531 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA2P51531 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA2P51531 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC31.48■■■□□ 2.63
SMARCA2P51531 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
SMARCA2P51531 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 AC015922.1-201ENST00000421102 1152 ntBASIC31.48■■■□□ 2.63
SMARCA2P51531 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC31.48■■■□□ 2.63
SMARCA2P51531 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 ADM-207ENST00000530439 1839 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC31.48■■■□□ 2.63
SMARCA2P51531 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC31.48■■■□□ 2.63
SMARCA2P51531 BSG-215ENST00000618006 1329 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA2P51531 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
SMARCA2P51531 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 MIR661-201ENST00000384842 89 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 AC005034.1-201ENST00000426657 489 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC31.47■■■□□ 2.63
SMARCA2P51531 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC31.47■■■□□ 2.63
SMARCA2P51531 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC31.47■■■□□ 2.63
SMARCA2P51531 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA2P51531 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 AC009336.1-201ENST00000608941 1553 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 HLA-DRB6-201ENST00000411500 1235 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA2P51531 DUTP2-201ENST00000519164 463 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 AC005225.4-201ENST00000557330 545 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA2P51531 AC099522.2-201ENST00000607001 744 ntBASIC31.47■■■□□ 2.63
SMARCA2P51531 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC31.47■■■□□ 2.63
SMARCA2P51531 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA2P51531 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA2P51531 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
SMARCA2P51531 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA2P51531 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
SMARCA2P51531 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA2P51531 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA2P51531 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA2P51531 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
SMARCA2P51531 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC31.46■■■□□ 2.63
SMARCA2P51531 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA2P51531 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC31.46■■■□□ 2.63
SMARCA2P51531 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA2P51531 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCA2P51531 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCA2P51531 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
SMARCA2P51531 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC31.45■■■□□ 2.63
SMARCA2P51531 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC31.45■■■□□ 2.63
SMARCA2P51531 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCA2P51531 AL355306.1-201ENST00000415580 579 ntBASIC31.45■■■□□ 2.63
SMARCA2P51531 POLD4-211ENST00000539074 714 ntTSL 3 BASIC31.45■■■□□ 2.63
SMARCA2P51531 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC31.45■■■□□ 2.63
SMARCA2P51531 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC31.45■■■□□ 2.62
SMARCA2P51531 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
SMARCA2P51531 PTGES2-AS1-201ENST00000443493 2100 ntBASIC31.45■■■□□ 2.62
SMARCA2P51531 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
SMARCA2P51531 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCA2P51531 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
SMARCA2P51531 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC31.44■■■□□ 2.62
SMARCA2P51531 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC31.44■■■□□ 2.62
SMARCA2P51531 CYB561-216ENST00000582297 897 ntTSL 3 BASIC31.44■■■□□ 2.62
SMARCA2P51531 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
SMARCA2P51531 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA2P51531 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 AC112191.1-201ENST00000523689 701 ntBASIC31.43■■■□□ 2.62
SMARCA2P51531 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC31.43■■■□□ 2.62
SMARCA2P51531 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms