Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
GABRA4P48169 KRT18P55-202ENST00000578578 1546 ntBASIC16.91■□□□□ 0.3
GABRA4P48169 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.91■□□□□ 0.3
GABRA4P48169 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 RNA5SP419-201ENST00000515908 135 ntBASIC16.91■□□□□ 0.3
GABRA4P48169 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
GABRA4P48169 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
GABRA4P48169 MTDHP3-201ENST00000594186 672 ntBASIC16.91■□□□□ 0.3
GABRA4P48169 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 AD001527.2-201ENST00000622994 785 ntBASIC16.91■□□□□ 0.3
GABRA4P48169 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 ABALON-201ENST00000629058 1903 ntBASIC16.91■□□□□ 0.3
GABRA4P48169 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.91■□□□□ 0.3
GABRA4P48169 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABRA4P48169 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
GABRA4P48169 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.9■□□□□ 0.3
GABRA4P48169 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GABRA4P48169 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.9■□□□□ 0.3
GABRA4P48169 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.9■□□□□ 0.3
GABRA4P48169 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.9■□□□□ 0.3
GABRA4P48169 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GABRA4P48169 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.9■□□□□ 0.3
GABRA4P48169 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
GABRA4P48169 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABRA4P48169 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
GABRA4P48169 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.89■□□□□ 0.29
GABRA4P48169 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.89■□□□□ 0.29
GABRA4P48169 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GABRA4P48169 AC138028.4-201ENST00000564984 1845 ntBASIC16.89■□□□□ 0.29
GABRA4P48169 AC009949.1-201ENST00000623048 1830 ntBASIC16.89■□□□□ 0.29
GABRA4P48169 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 AL354751.1-201ENST00000412768 1863 ntBASIC16.89■□□□□ 0.29
GABRA4P48169 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.89■□□□□ 0.29
GABRA4P48169 DDX43P3-201ENST00000441064 443 ntBASIC16.89■□□□□ 0.29
GABRA4P48169 FAM197Y8-203ENST00000450145 560 ntBASIC16.89■□□□□ 0.29
GABRA4P48169 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.89■□□□□ 0.29
GABRA4P48169 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.89■□□□□ 0.29
GABRA4P48169 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABRA4P48169 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.89■□□□□ 0.29
GABRA4P48169 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.89■□□□□ 0.29
GABRA4P48169 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms