Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.04■□□□□ 0.96
NEDD4P46934 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NEDD4P46934 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.04■□□□□ 0.96
NEDD4P46934 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.04■□□□□ 0.96
NEDD4P46934 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
NEDD4P46934 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.04■□□□□ 0.96
NEDD4P46934 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.04■□□□□ 0.96
NEDD4P46934 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEDD4P46934 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.03■□□□□ 0.96
NEDD4P46934 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.03■□□□□ 0.96
NEDD4P46934 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NEDD4P46934 TP73-AS1-210ENST00000637775 1455 ntBASIC21.03■□□□□ 0.96
NEDD4P46934 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.03■□□□□ 0.96
NEDD4P46934 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.03■□□□□ 0.96
NEDD4P46934 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.03■□□□□ 0.96
NEDD4P46934 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.03■□□□□ 0.96
NEDD4P46934 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.03■□□□□ 0.96
NEDD4P46934 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.03■□□□□ 0.96
NEDD4P46934 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEDD4P46934 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.03■□□□□ 0.96
NEDD4P46934 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.03■□□□□ 0.96
NEDD4P46934 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NEDD4P46934 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NEDD4P46934 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.02■□□□□ 0.96
NEDD4P46934 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
NEDD4P46934 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.02■□□□□ 0.96
NEDD4P46934 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.02■□□□□ 0.96
NEDD4P46934 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.02■□□□□ 0.96
NEDD4P46934 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NEDD4P46934 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NEDD4P46934 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NEDD4P46934 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
NEDD4P46934 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.02■□□□□ 0.96
NEDD4P46934 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.02■□□□□ 0.96
NEDD4P46934 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEDD4P46934 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NEDD4P46934 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NEDD4P46934 NUS1P1-201ENST00000446295 882 ntBASIC21.02■□□□□ 0.95
NEDD4P46934 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.02■□□□□ 0.95
NEDD4P46934 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.02■□□□□ 0.95
NEDD4P46934 AC114341.1-201ENST00000618070 349 ntBASIC21.02■□□□□ 0.95
NEDD4P46934 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NEDD4P46934 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NEDD4P46934 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NEDD4P46934 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.01■□□□□ 0.95
NEDD4P46934 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.01■□□□□ 0.95
NEDD4P46934 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 RCN1P2-201ENST00000398357 915 ntBASIC21.01■□□□□ 0.95
NEDD4P46934 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.01■□□□□ 0.95
NEDD4P46934 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.01■□□□□ 0.95
NEDD4P46934 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 AC011467.2-201ENST00000598425 242 ntBASIC21.01■□□□□ 0.95
NEDD4P46934 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.01■□□□□ 0.95
NEDD4P46934 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.01■□□□□ 0.95
NEDD4P46934 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEDD4P46934 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NEDD4P46934 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21■□□□□ 0.95
NEDD4P46934 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21■□□□□ 0.95
NEDD4P46934 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
NEDD4P46934 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEDD4P46934 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms