Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFSF9P41273 AC111152.3-201ENST00000569699 673 ntBASIC19.33■□□□□ 0.68
TNFSF9P41273 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFSF9P41273 RN7SL510P-201ENST00000581311 263 ntBASIC19.33■□□□□ 0.68
TNFSF9P41273 AL591684.3-201ENST00000605187 298 ntBASIC19.33■□□□□ 0.68
TNFSF9P41273 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF9P41273 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF9P41273 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF9P41273 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF9P41273 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF9P41273 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.32■□□□□ 0.68
TNFSF9P41273 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
TNFSF9P41273 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFSF9P41273 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFSF9P41273 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.32■□□□□ 0.68
TNFSF9P41273 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.32■□□□□ 0.68
TNFSF9P41273 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.32■□□□□ 0.68
TNFSF9P41273 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFSF9P41273 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.32■□□□□ 0.68
TNFSF9P41273 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.32■□□□□ 0.68
TNFSF9P41273 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TNFSF9P41273 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 NOC2LP1-202ENST00000452600 2235 ntBASIC19.32■□□□□ 0.68
TNFSF9P41273 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TNFSF9P41273 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF9P41273 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF9P41273 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.31■□□□□ 0.68
TNFSF9P41273 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.31■□□□□ 0.68
TNFSF9P41273 AL691432.3-201ENST00000621860 400 ntBASIC19.31■□□□□ 0.68
TNFSF9P41273 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 AC018470.1-201ENST00000624790 3129 ntBASIC19.31■□□□□ 0.68
TNFSF9P41273 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF9P41273 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF9P41273 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF9P41273 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF9P41273 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF9P41273 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TNFSF9P41273 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFSF9P41273 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFSF9P41273 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF9P41273 AC132008.2-207ENST00000454517 770 ntBASIC19.3■□□□□ 0.68
TNFSF9P41273 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms