Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V1AP38606 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP6V1AP38606 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP6V1AP38606 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.65■■□□□ 1.22
ATP6V1AP38606 IGLL3P-201ENST00000412472 434 ntBASIC22.65■■□□□ 1.22
ATP6V1AP38606 DUTP2-201ENST00000519164 463 ntBASIC22.65■■□□□ 1.22
ATP6V1AP38606 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP6V1AP38606 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
ATP6V1AP38606 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V1AP38606 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
ATP6V1AP38606 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V1AP38606 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.64■■□□□ 1.21
ATP6V1AP38606 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 KLF4P1-201ENST00000412782 1185 ntBASIC22.64■■□□□ 1.21
ATP6V1AP38606 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 SIGLEC30P-201ENST00000455569 941 ntBASIC22.64■■□□□ 1.21
ATP6V1AP38606 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 AL031432.2-201ENST00000566714 459 ntBASIC22.64■■□□□ 1.21
ATP6V1AP38606 AL928711.1-201ENST00000570165 459 ntBASIC22.64■■□□□ 1.21
ATP6V1AP38606 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
ATP6V1AP38606 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V1AP38606 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V1AP38606 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 AC106028.4-201ENST00000614509 607 ntBASIC22.63■■□□□ 1.21
ATP6V1AP38606 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V1AP38606 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V1AP38606 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
ATP6V1AP38606 AC073130.3-201ENST00000624389 2278 ntBASIC22.62■■□□□ 1.21
ATP6V1AP38606 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 AC004877.2-201ENST00000623941 599 ntBASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms