Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.8■□□□□ 0.44
HMGCLP35914 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLP35914 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.8■□□□□ 0.44
HMGCLP35914 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HMGCLP35914 AC092119.3-201ENST00000612618 583 ntBASIC17.8■□□□□ 0.44
HMGCLP35914 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGCLP35914 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLP35914 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLP35914 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLP35914 LINC00265-3P-201ENST00000447588 903 ntBASIC17.79■□□□□ 0.44
HMGCLP35914 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.79■□□□□ 0.44
HMGCLP35914 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 AC091607.1-201ENST00000490318 1060 ntBASIC17.79■□□□□ 0.44
HMGCLP35914 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLP35914 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 GNAS-203ENST00000306120 1878 ntBASIC17.79■□□□□ 0.44
HMGCLP35914 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLP35914 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLP35914 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLP35914 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLP35914 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HMGCLP35914 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMGCLP35914 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HMGCLP35914 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 IGHV3-47-201ENST00000425060 335 ntBASIC17.78■□□□□ 0.44
HMGCLP35914 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCLP35914 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 KRT17P6-201ENST00000453795 1220 ntBASIC17.78■□□□□ 0.44
HMGCLP35914 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCLP35914 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCLP35914 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCLP35914 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCLP35914 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMGCLP35914 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGCLP35914 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLP35914 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLP35914 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms