Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 AC036111.1-201ENST00000533973 1582 ntBASIC18.09■□□□□ 0.49
RPA3P35244 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 ECEL1P3-201ENST00000427961 737 ntBASIC18.09■□□□□ 0.49
RPA3P35244 LIN28AP1-201ENST00000429574 405 ntBASIC18.09■□□□□ 0.49
RPA3P35244 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 SLC25A3P1-201ENST00000443844 931 ntBASIC18.09■□□□□ 0.49
RPA3P35244 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 AC012306.2-201ENST00000609350 630 ntBASIC18.09■□□□□ 0.49
RPA3P35244 AC005363.2-201ENST00000618631 242 ntBASIC18.09■□□□□ 0.49
RPA3P35244 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPA3P35244 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPA3P35244 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPA3P35244 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.08■□□□□ 0.49
RPA3P35244 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RPA3P35244 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RPA3P35244 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.08■□□□□ 0.49
RPA3P35244 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RPA3P35244 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.08■□□□□ 0.49
RPA3P35244 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPA3P35244 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 ATP5G1P1-201ENST00000448724 379 ntBASIC18.08■□□□□ 0.48
RPA3P35244 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.08■□□□□ 0.48
RPA3P35244 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RPA3P35244 CR769767.2-201ENST00000622735 460 ntBASIC18.08■□□□□ 0.48
RPA3P35244 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
RPA3P35244 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.08■□□□□ 0.48
RPA3P35244 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RPA3P35244 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPA3P35244 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.48
RPA3P35244 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RPA3P35244 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.07■□□□□ 0.48
RPA3P35244 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.07■□□□□ 0.48
RPA3P35244 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.07■□□□□ 0.48
RPA3P35244 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.07■□□□□ 0.48
RPA3P35244 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.07■□□□□ 0.48
RPA3P35244 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RPA3P35244 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RPA3P35244 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 AL138688.1-201ENST00000624851 1594 ntBASIC18.07■□□□□ 0.48
RPA3P35244 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.07■□□□□ 0.48
RPA3P35244 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
RPA3P35244 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPA3P35244 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPA3P35244 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
RPA3P35244 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RPA3P35244 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms