Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PCDHB19P-201ENST00000570871 2371 ntBASIC13.18□□□□□ -0.3
CKS2P33552 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 AC133963.1-201ENST00000504166 1679 ntBASIC13.18□□□□□ -0.3
CKS2P33552 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CKS2P33552 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS2P33552 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
CKS2P33552 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CKS2P33552 ZNRF2P3-201ENST00000424200 374 ntBASIC13.18□□□□□ -0.3
CKS2P33552 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CKS2P33552 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CKS2P33552 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.18□□□□□ -0.3
CKS2P33552 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.18□□□□□ -0.3
CKS2P33552 HLA-B-256ENST00000639848 1089 ntBASIC13.18□□□□□ -0.3
CKS2P33552 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CKS2P33552 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS2P33552 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.18□□□□□ -0.3
CKS2P33552 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS2P33552 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
CKS2P33552 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS2P33552 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS2P33552 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.17□□□□□ -0.3
CKS2P33552 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.17□□□□□ -0.3
CKS2P33552 KRT18P5-201ENST00000436075 1291 ntBASIC13.17□□□□□ -0.3
CKS2P33552 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.17□□□□□ -0.3
CKS2P33552 Z85996.1-201ENST00000494644 937 ntBASIC13.17□□□□□ -0.3
CKS2P33552 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.17□□□□□ -0.3
CKS2P33552 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CKS2P33552 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 AL109659.2-201ENST00000606809 1674 ntBASIC13.17□□□□□ -0.3
CKS2P33552 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.17□□□□□ -0.3
CKS2P33552 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CKS2P33552 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS2P33552 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS2P33552 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms