Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PGGT1BP1-201ENST00000455321 1023 ntBASIC19.17■□□□□ 0.66
HOXD11P31277 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXD11P31277 CA15P1-201ENST00000481698 905 ntBASIC19.17■□□□□ 0.66
HOXD11P31277 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 AC109927.2-201ENST00000506416 303 ntBASIC19.17■□□□□ 0.66
HOXD11P31277 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXD11P31277 RN7SKP265-201ENST00000516448 223 ntBASIC19.17■□□□□ 0.66
HOXD11P31277 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXD11P31277 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXD11P31277 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXD11P31277 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXD11P31277 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXD11P31277 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXD11P31277 AC108865.2-201ENST00000606881 432 ntBASIC19.17■□□□□ 0.66
HOXD11P31277 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXD11P31277 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXD11P31277 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 OR6C71P-201ENST00000432580 913 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 KRT18P67-201ENST00000432816 1264 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 DNAJB3-201ENST00000446806 729 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 AF238378.1-201ENST00000526806 358 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HOXD11P31277 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 PIGPP4-201ENST00000584447 307 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 AC107982.3-201ENST00000584957 985 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC138894.3-201ENST00000603787 634 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 AC084824.5-201ENST00000612009 413 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 REXO1L6P-202ENST00000619970 1078 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC090582.1-201ENST00000636321 199 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXD11P31277 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXD11P31277 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXD11P31277 AC242852.2-201ENST00000615738 1807 ntBASIC19.16■□□□□ 0.66
HOXD11P31277 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXD11P31277 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXD11P31277 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXD11P31277 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXD11P31277 AC026471.1-201ENST00000564629 3026 ntBASIC19.15■□□□□ 0.66
HOXD11P31277 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXD11P31277 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXD11P31277 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXD11P31277 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HOXD11P31277 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HOXD11P31277 MIR770-201ENST00000390219 98 ntBASIC19.15■□□□□ 0.66
HOXD11P31277 YBX2P1-201ENST00000394192 760 ntBASIC19.15■□□□□ 0.66
HOXD11P31277 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HOXD11P31277 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXD11P31277 NEK4P1-201ENST00000433383 879 ntBASIC19.15■□□□□ 0.66
HOXD11P31277 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXD11P31277 TOB2P1-201ENST00000469761 992 ntBASIC19.15■□□□□ 0.66
HOXD11P31277 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXD11P31277 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXD11P31277 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXD11P31277 AC009065.1-201ENST00000564055 1225 ntBASIC19.15■□□□□ 0.66
HOXD11P31277 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HOXD11P31277 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXD11P31277 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXD11P31277 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HOXD11P31277 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXD11P31277 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXD11P31277 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
HOXD11P31277 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXD11P31277 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXD11P31277 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms