Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP8P22894 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP8P22894 AC096633.1-201ENST00000422446 749 ntBASIC18.79■□□□□ 0.6
MMP8P22894 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.79■□□□□ 0.6
MMP8P22894 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 GUSBP12-201ENST00000513727 720 ntBASIC18.79■□□□□ 0.6
MMP8P22894 KRT8P26-201ENST00000534154 1276 ntBASIC18.79■□□□□ 0.6
MMP8P22894 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP8P22894 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MMP8P22894 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP8P22894 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP8P22894 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP8P22894 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 PP12613-201ENST00000424958 2230 ntBASIC18.78■□□□□ 0.6
MMP8P22894 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP8P22894 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP8P22894 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MMP8P22894 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP8P22894 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.78■□□□□ 0.6
MMP8P22894 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP8P22894 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 AC090616.6-201ENST00000582640 721 ntBASIC18.78■□□□□ 0.6
MMP8P22894 AL592071.1-201ENST00000611956 408 ntBASIC18.78■□□□□ 0.6
MMP8P22894 LINC01451-201ENST00000623792 534 ntBASIC18.78■□□□□ 0.6
MMP8P22894 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP8P22894 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.78■□□□□ 0.6
MMP8P22894 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP8P22894 HLA-J-201ENST00000462773 1622 ntBASIC18.78■□□□□ 0.6
MMP8P22894 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP8P22894 AC097374.2-201ENST00000618617 1306 ntBASIC18.77■□□□□ 0.6
MMP8P22894 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MMP8P22894 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.77■□□□□ 0.6
MMP8P22894 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MMP8P22894 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
MMP8P22894 AL845331.1-201ENST00000424978 1190 ntBASIC18.77■□□□□ 0.6
MMP8P22894 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.77■□□□□ 0.6
MMP8P22894 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
MMP8P22894 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP8P22894 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
MMP8P22894 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.77■□□□□ 0.6
MMP8P22894 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP8P22894 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
MMP8P22894 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MMP8P22894 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 BX276092.7-203ENST00000637198 1536 ntBASIC18.76■□□□□ 0.59
MMP8P22894 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms