Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NCK1P16333 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NCK1P16333 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.92■□□□□ 0.3
NCK1P16333 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.91■□□□□ 0.3
NCK1P16333 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 DUTP2-201ENST00000519164 463 ntBASIC16.91■□□□□ 0.3
NCK1P16333 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.91■□□□□ 0.3
NCK1P16333 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.91■□□□□ 0.3
NCK1P16333 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NCK1P16333 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCK1P16333 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCK1P16333 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 AC106886.4-201ENST00000623557 2502 ntBASIC16.9■□□□□ 0.3
NCK1P16333 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.9■□□□□ 0.3
NCK1P16333 CA15P1-201ENST00000481698 905 ntBASIC16.9■□□□□ 0.3
NCK1P16333 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.9■□□□□ 0.3
NCK1P16333 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.9■□□□□ 0.3
NCK1P16333 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.9■□□□□ 0.3
NCK1P16333 CD177P1-201ENST00000606252 935 ntBASIC16.9■□□□□ 0.3
NCK1P16333 DGCR10-201ENST00000609839 495 ntBASIC16.9■□□□□ 0.3
NCK1P16333 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
NCK1P16333 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCK1P16333 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.9■□□□□ 0.3
NCK1P16333 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCK1P16333 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NCK1P16333 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.89■□□□□ 0.3
NCK1P16333 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
NCK1P16333 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.89■□□□□ 0.29
NCK1P16333 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.89■□□□□ 0.29
NCK1P16333 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NCK1P16333 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 CRYGFP-201ENST00000418459 633 ntBASIC16.89■□□□□ 0.29
NCK1P16333 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.89■□□□□ 0.29
NCK1P16333 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.89■□□□□ 0.29
NCK1P16333 AC092666.2-201ENST00000613287 246 ntBASIC16.89■□□□□ 0.29
NCK1P16333 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms