Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SFTPBP07988 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SFTPBP07988 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.57■□□□□ 0.08
SFTPBP07988 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SFTPBP07988 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.57■□□□□ 0.08
SFTPBP07988 AC099398.1-201ENST00000567919 2776 ntBASIC15.57■□□□□ 0.08
SFTPBP07988 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 GNAS-203ENST00000306120 1878 ntBASIC15.57■□□□□ 0.08
SFTPBP07988 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SFTPBP07988 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 MIR149-201ENST00000384879 89 ntBASIC15.56■□□□□ 0.08
SFTPBP07988 AC104076.2-201ENST00000448912 469 ntBASIC15.56■□□□□ 0.08
SFTPBP07988 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
SFTPBP07988 AC006011.2-201ENST00000621313 1158 ntBASIC15.56■□□□□ 0.08
SFTPBP07988 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SFTPBP07988 KRT8P7-201ENST00000533003 1432 ntBASIC15.56■□□□□ 0.08
SFTPBP07988 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.56■□□□□ 0.08
SFTPBP07988 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.56■□□□□ 0.08
SFTPBP07988 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SFTPBP07988 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFTPBP07988 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.55■□□□□ 0.08
SFTPBP07988 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 FLJ13224-201ENST00000313737 1514 ntBASIC15.55■□□□□ 0.08
SFTPBP07988 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SFTPBP07988 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.55■□□□□ 0.08
SFTPBP07988 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.55■□□□□ 0.08
SFTPBP07988 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.55■□□□□ 0.08
SFTPBP07988 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SFTPBP07988 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.55■□□□□ 0.08
SFTPBP07988 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
SFTPBP07988 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.55■□□□□ 0.08
SFTPBP07988 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFTPBP07988 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.55■□□□□ 0.08
SFTPBP07988 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms