Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 TSSC2-201ENST00000450217 709 ntBASIC18.14■□□□□ 0.49
HLA-DQB2P05538 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 AC116407.2-201ENST00000613639 860 ntBASIC18.14■□□□□ 0.49
HLA-DQB2P05538 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQB2P05538 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 AP002383.4-201ENST00000442518 975 ntBASIC18.13■□□□□ 0.49
HLA-DQB2P05538 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 AL353801.3-201ENST00000609898 542 ntBASIC18.13■□□□□ 0.49
HLA-DQB2P05538 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQB2P05538 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 AC091607.1-201ENST00000490318 1060 ntBASIC18.12■□□□□ 0.49
HLA-DQB2P05538 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 AC091076.1-201ENST00000610741 619 ntBASIC18.12■□□□□ 0.49
HLA-DQB2P05538 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQB2P05538 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 AC005336.2-201ENST00000593183 939 ntBASIC18.11■□□□□ 0.49
HLA-DQB2P05538 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms