Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.06□□□□□ -0.64
APOBP04114 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
APOBP04114 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
APOBP04114 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.06□□□□□ -0.64
APOBP04114 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.06□□□□□ -0.64
APOBP04114 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.05□□□□□ -0.64
APOBP04114 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.05□□□□□ -0.64
APOBP04114 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
APOBP04114 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 BID-204ENST00000399767 2129 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
APOBP04114 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 NME2P1-201ENST00000426182 414 ntBASIC11.05□□□□□ -0.64
APOBP04114 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 AC022494.1-201ENST00000466044 728 ntBASIC11.05□□□□□ -0.64
APOBP04114 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.05□□□□□ -0.64
APOBP04114 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
APOBP04114 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.05□□□□□ -0.64
APOBP04114 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOBP04114 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 AC003669.1-201ENST00000334569 611 ntBASIC11.04□□□□□ -0.64
APOBP04114 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.04□□□□□ -0.64
APOBP04114 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 PTCHD3P3-201ENST00000403073 906 ntBASIC11.04□□□□□ -0.64
APOBP04114 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.04□□□□□ -0.64
APOBP04114 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
APOBP04114 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 AC018445.3-201ENST00000624177 1945 ntBASIC11.04□□□□□ -0.64
APOBP04114 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.04□□□□□ -0.64
APOBP04114 KRT8P48-201ENST00000515599 1220 ntBASIC11.04□□□□□ -0.64
APOBP04114 HILS1-202ENST00000545329 423 ntBASIC11.04□□□□□ -0.64
APOBP04114 AC025048.6-201ENST00000634326 1161 ntBASIC11.04□□□□□ -0.64
APOBP04114 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOBP04114 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC11.04□□□□□ -0.64
APOBP04114 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
APOBP04114 EFS-203ENST00000429593 2610 ntTSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
APOBP04114 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms