Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNA1P02708 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 AC004706.3-202ENST00000621574 984 ntBASIC19.36■□□□□ 0.69
CHRNA1P02708 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA1P02708 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA1P02708 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.35■□□□□ 0.69
CHRNA1P02708 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNA1P02708 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA1P02708 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHRNA1P02708 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHRNA1P02708 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA1P02708 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA1P02708 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHRNA1P02708 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA1P02708 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNA1P02708 AC004832.2-201ENST00000426397 482 ntBASIC19.35■□□□□ 0.69
CHRNA1P02708 KRT18P2-201ENST00000447938 1258 ntBASIC19.35■□□□□ 0.69
CHRNA1P02708 AC108751.1-201ENST00000490852 363 ntBASIC19.35■□□□□ 0.69
CHRNA1P02708 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.35■□□□□ 0.69
CHRNA1P02708 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNA1P02708 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.35■□□□□ 0.69
CHRNA1P02708 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA1P02708 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNA1P02708 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHRNA1P02708 AC100803.2-201ENST00000562459 1963 ntBASIC19.35■□□□□ 0.69
CHRNA1P02708 WIZP1-201ENST00000531444 2299 ntBASIC19.35■□□□□ 0.69
CHRNA1P02708 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA1P02708 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA1P02708 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHRNA1P02708 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CHRNA1P02708 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA1P02708 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHRNA1P02708 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA1P02708 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.34■□□□□ 0.69
CHRNA1P02708 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.34■□□□□ 0.69
CHRNA1P02708 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.34■□□□□ 0.69
CHRNA1P02708 AC064836.3-201ENST00000607928 673 ntBASIC19.34■□□□□ 0.69
CHRNA1P02708 AC019129.2-201ENST00000609837 1235 ntBASIC19.34■□□□□ 0.69
CHRNA1P02708 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 AC006504.4-201ENST00000592118 1568 ntBASIC19.34■□□□□ 0.69
CHRNA1P02708 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.34■□□□□ 0.69
CHRNA1P02708 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA1P02708 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA1P02708 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.33■□□□□ 0.69
CHRNA1P02708 AC135776.1-201ENST00000319817 2481 ntBASIC19.33■□□□□ 0.69
CHRNA1P02708 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA1P02708 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.33■□□□□ 0.69
CHRNA1P02708 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA1P02708 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CHRNA1P02708 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA1P02708 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA1P02708 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA1P02708 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA1P02708 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHRNA1P02708 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNA1P02708 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNA1P02708 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CHRNA1P02708 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA1P02708 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNA1P02708 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA1P02708 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA1P02708 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA1P02708 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA1P02708 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.33■□□□□ 0.68
CHRNA1P02708 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.33■□□□□ 0.68
CHRNA1P02708 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA1P02708 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CHRNA1P02708 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA1P02708 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA1P02708 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHRNA1P02708 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA1P02708 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms