Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC005332.3-201ENST00000589904 676 ntBASIC18.68■□□□□ 0.58
LMNAP02545 AP001160.2-201ENST00000596071 487 ntBASIC18.68■□□□□ 0.58
LMNAP02545 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.68■□□□□ 0.58
LMNAP02545 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.68■□□□□ 0.58
LMNAP02545 AC083906.6-201ENST00000641366 219 ntBASIC18.68■□□□□ 0.58
LMNAP02545 AC079781.4-201ENST00000641908 219 ntBASIC18.68■□□□□ 0.58
LMNAP02545 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.68■□□□□ 0.58
LMNAP02545 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LMNAP02545 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LMNAP02545 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.67■□□□□ 0.58
LMNAP02545 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LMNAP02545 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.67■□□□□ 0.58
LMNAP02545 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LMNAP02545 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.67■□□□□ 0.58
LMNAP02545 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.67■□□□□ 0.58
LMNAP02545 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.67■□□□□ 0.58
LMNAP02545 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.67■□□□□ 0.58
LMNAP02545 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNAP02545 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNAP02545 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNAP02545 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNAP02545 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LMNAP02545 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LMNAP02545 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNAP02545 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LMNAP02545 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
LMNAP02545 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 SIRPAP1-201ENST00000448467 1770 ntBASIC18.66■□□□□ 0.58
LMNAP02545 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LMNAP02545 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LMNAP02545 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
LMNAP02545 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNAP02545 UPF3AP3-201ENST00000420996 769 ntBASIC18.66■□□□□ 0.58
LMNAP02545 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNAP02545 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.66■□□□□ 0.58
LMNAP02545 VENTXP7-201ENST00000475503 772 ntBASIC18.66■□□□□ 0.58
LMNAP02545 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.66■□□□□ 0.58
LMNAP02545 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.66■□□□□ 0.58
LMNAP02545 AC139887.3-201ENST00000568585 713 ntBASIC18.66■□□□□ 0.58
LMNAP02545 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.66■□□□□ 0.58
LMNAP02545 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.66■□□□□ 0.58
LMNAP02545 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.66■□□□□ 0.58
LMNAP02545 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LMNAP02545 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.66■□□□□ 0.58
LMNAP02545 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNAP02545 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
LMNAP02545 GPAT2P1-201ENST00000444924 1672 ntBASIC18.66■□□□□ 0.58
LMNAP02545 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNAP02545 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNAP02545 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LMNAP02545 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LMNAP02545 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.65■□□□□ 0.58
LMNAP02545 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNAP02545 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LMNAP02545 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNAP02545 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNAP02545 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 PGAM5P1-201ENST00000518923 814 ntBASIC18.65■□□□□ 0.58
LMNAP02545 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNAP02545 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms