Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 NIFKP9-201ENST00000419265 221 ntBASIC15.99■□□□□ 0.15
CDRT1O95170 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDRT1O95170 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.99■□□□□ 0.15
CDRT1O95170 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.99■□□□□ 0.15
CDRT1O95170 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.99■□□□□ 0.15
CDRT1O95170 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.99■□□□□ 0.15
CDRT1O95170 AC110285.5-201ENST00000611501 352 ntBASIC15.99■□□□□ 0.15
CDRT1O95170 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 PCDHA14-201ENST00000506751 2298 ntBASIC15.99■□□□□ 0.15
CDRT1O95170 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.99■□□□□ 0.15
CDRT1O95170 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDRT1O95170 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.99■□□□□ 0.15
CDRT1O95170 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.99■□□□□ 0.15
CDRT1O95170 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CDRT1O95170 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 AC133963.1-201ENST00000504166 1679 ntBASIC15.99■□□□□ 0.15
CDRT1O95170 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDRT1O95170 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CDRT1O95170 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDRT1O95170 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 AC093010.1-201ENST00000473625 1624 ntBASIC15.98■□□□□ 0.15
CDRT1O95170 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.98■□□□□ 0.15
CDRT1O95170 ID1-201ENST00000376105 1233 ntBASIC15.98■□□□□ 0.15
CDRT1O95170 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 RPS2P4-201ENST00000476944 856 ntBASIC15.98■□□□□ 0.15
CDRT1O95170 AP002982.1-201ENST00000492365 877 ntBASIC15.98■□□□□ 0.15
CDRT1O95170 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.98■□□□□ 0.15
CDRT1O95170 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 AL162727.3-201ENST00000635661 2787 ntBASIC15.98■□□□□ 0.15
CDRT1O95170 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CDRT1O95170 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CDRT1O95170 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.98■□□□□ 0.15
CDRT1O95170 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT1O95170 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CDRT1O95170 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDRT1O95170 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDRT1O95170 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDRT1O95170 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDRT1O95170 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.97■□□□□ 0.15
CDRT1O95170 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 AC091390.4-202ENST00000476426 537 ntBASIC15.97■□□□□ 0.15
CDRT1O95170 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.97■□□□□ 0.15
CDRT1O95170 KRT18P6-201ENST00000555540 1265 ntBASIC15.97■□□□□ 0.15
CDRT1O95170 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDRT1O95170 RN7SL471P-201ENST00000580476 299 ntBASIC15.97■□□□□ 0.15
CDRT1O95170 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDRT1O95170 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
CDRT1O95170 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDRT1O95170 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT1O95170 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDRT1O95170 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms