Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
KDM4BO94953 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM4BO94953 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.75■□□□□ 0.11
KDM4BO94953 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM4BO94953 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
KDM4BO94953 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM4BO94953 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.75■□□□□ 0.11
KDM4BO94953 REXO1L10P-201ENST00000615707 1290 ntBASIC15.75■□□□□ 0.11
KDM4BO94953 REXO1L12P-201ENST00000622156 912 ntBASIC15.75■□□□□ 0.11
KDM4BO94953 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM4BO94953 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
KDM4BO94953 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 GPAT2P1-201ENST00000444924 1672 ntBASIC15.75■□□□□ 0.11
KDM4BO94953 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
KDM4BO94953 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM4BO94953 PHGDH-209ENST00000641074 1780 ntBASIC15.75■□□□□ 0.11
KDM4BO94953 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
KDM4BO94953 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 AL355355.2-201ENST00000442321 338 ntBASIC15.74■□□□□ 0.11
KDM4BO94953 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.74■□□□□ 0.11
KDM4BO94953 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.74■□□□□ 0.11
KDM4BO94953 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.74■□□□□ 0.11
KDM4BO94953 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.74■□□□□ 0.11
KDM4BO94953 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
KDM4BO94953 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.74■□□□□ 0.11
KDM4BO94953 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 GMCL1P1-201ENST00000463439 1581 ntBASIC15.74■□□□□ 0.11
KDM4BO94953 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KDM4BO94953 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.74■□□□□ 0.11
KDM4BO94953 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KDM4BO94953 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.73■□□□□ 0.11
KDM4BO94953 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 AL391005.1-201ENST00000623953 2435 ntBASIC15.73■□□□□ 0.11
KDM4BO94953 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.73■□□□□ 0.11
KDM4BO94953 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.73■□□□□ 0.11
KDM4BO94953 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.73■□□□□ 0.11
KDM4BO94953 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
KDM4BO94953 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KDM4BO94953 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms