Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
BEST1O76090 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
BEST1O76090 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
BEST1O76090 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
BEST1O76090 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST1O76090 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST1O76090 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST1O76090 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BEST1O76090 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 NOC2LP1-202ENST00000452600 2235 ntBASIC18.74■□□□□ 0.59
BEST1O76090 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST1O76090 RNF165-205ENST00000588679 2904 ntBASIC18.74■□□□□ 0.59
BEST1O76090 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.74■□□□□ 0.59
BEST1O76090 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.74■□□□□ 0.59
BEST1O76090 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.74■□□□□ 0.59
BEST1O76090 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.74■□□□□ 0.59
BEST1O76090 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST1O76090 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.74■□□□□ 0.59
BEST1O76090 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST1O76090 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.74■□□□□ 0.59
BEST1O76090 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST1O76090 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BEST1O76090 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BEST1O76090 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.73■□□□□ 0.59
BEST1O76090 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.73■□□□□ 0.59
BEST1O76090 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST1O76090 AF238378.1-201ENST00000526806 358 ntBASIC18.73■□□□□ 0.59
BEST1O76090 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.73■□□□□ 0.59
BEST1O76090 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.73■□□□□ 0.59
BEST1O76090 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.73■□□□□ 0.59
BEST1O76090 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.73■□□□□ 0.59
BEST1O76090 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BEST1O76090 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.73■□□□□ 0.59
BEST1O76090 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST1O76090 REXO1L6P-202ENST00000619970 1078 ntBASIC18.73■□□□□ 0.59
BEST1O76090 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
BEST1O76090 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST1O76090 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
BEST1O76090 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST1O76090 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.73■□□□□ 0.59
BEST1O76090 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BEST1O76090 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms