Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.32■□□□□ 0.36
GDF9O60383 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 KRT8P47-201ENST00000604727 1398 ntBASIC17.32■□□□□ 0.36
GDF9O60383 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GDF9O60383 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GDF9O60383 AC007274.1-201ENST00000439805 662 ntBASIC17.32■□□□□ 0.36
GDF9O60383 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.32■□□□□ 0.36
GDF9O60383 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.32■□□□□ 0.36
GDF9O60383 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.32■□□□□ 0.36
GDF9O60383 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.32■□□□□ 0.36
GDF9O60383 AC012645.4-201ENST00000610691 1061 ntBASIC17.32■□□□□ 0.36
GDF9O60383 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.32■□□□□ 0.36
GDF9O60383 AC091812.2-201ENST00000619081 385 ntBASIC17.32■□□□□ 0.36
GDF9O60383 AJ011932.1-201ENST00000621707 465 ntBASIC17.32■□□□□ 0.36
GDF9O60383 AC012183.1-201ENST00000625197 499 ntBASIC17.32■□□□□ 0.36
GDF9O60383 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GDF9O60383 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF9O60383 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.31■□□□□ 0.36
GDF9O60383 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.31■□□□□ 0.36
GDF9O60383 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.31■□□□□ 0.36
GDF9O60383 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.31■□□□□ 0.36
GDF9O60383 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.31■□□□□ 0.36
GDF9O60383 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 LINC00628-201ENST00000628516 1289 ntBASIC17.31■□□□□ 0.36
GDF9O60383 AC105339.1-204ENST00000636249 355 ntBASIC17.31■□□□□ 0.36
GDF9O60383 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
GDF9O60383 MYLKP1-201ENST00000509077 1580 ntBASIC17.31■□□□□ 0.36
GDF9O60383 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
GDF9O60383 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF9O60383 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
GDF9O60383 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF9O60383 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.3■□□□□ 0.36
GDF9O60383 AC025580.3-201ENST00000617932 1424 ntBASIC17.3■□□□□ 0.36
GDF9O60383 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
GDF9O60383 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.3■□□□□ 0.36
GDF9O60383 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.3■□□□□ 0.36
GDF9O60383 FAM86GP-201ENST00000448322 971 ntBASIC17.3■□□□□ 0.36
GDF9O60383 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.3■□□□□ 0.36
GDF9O60383 AC074386.1-202ENST00000463561 864 ntBASIC17.3■□□□□ 0.36
GDF9O60383 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.3■□□□□ 0.36
GDF9O60383 AC093214.1-201ENST00000511688 1107 ntBASIC17.3■□□□□ 0.36
GDF9O60383 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF9O60383 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.3■□□□□ 0.36
GDF9O60383 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GDF9O60383 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF9O60383 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.3■□□□□ 0.36
GDF9O60383 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.29■□□□□ 0.36
GDF9O60383 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.29■□□□□ 0.36
GDF9O60383 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 AC010460.3-201ENST00000511359 1579 ntBASIC17.29■□□□□ 0.36
GDF9O60383 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.29■□□□□ 0.36
GDF9O60383 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 DUX4L27-201ENST00000554796 1261 ntBASIC17.29■□□□□ 0.36
GDF9O60383 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 AC096734.2-201ENST00000562054 433 ntBASIC17.29■□□□□ 0.36
GDF9O60383 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.29■□□□□ 0.36
GDF9O60383 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
GDF9O60383 AC073592.5-201ENST00000624854 528 ntBASIC17.29■□□□□ 0.36
GDF9O60383 AC092902.6-201ENST00000641783 218 ntBASIC17.29■□□□□ 0.36
GDF9O60383 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.29■□□□□ 0.36
GDF9O60383 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF9O60383 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms