Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 ABHD17AP1-201ENST00000358206 933 ntBASIC17.42■□□□□ 0.38
HDAC3O15379 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.42■□□□□ 0.38
HDAC3O15379 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.42■□□□□ 0.38
HDAC3O15379 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 AC116407.2-201ENST00000613639 860 ntBASIC17.42■□□□□ 0.38
HDAC3O15379 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HDAC3O15379 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HDAC3O15379 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HDAC3O15379 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.41■□□□□ 0.38
HDAC3O15379 LINC00167-201ENST00000530583 1419 ntBASIC17.41■□□□□ 0.38
HDAC3O15379 AC092338.2-201ENST00000568827 1415 ntBASIC17.41■□□□□ 0.38
HDAC3O15379 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 AL118508.1-201ENST00000613502 2345 ntBASIC17.41■□□□□ 0.38
HDAC3O15379 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC3O15379 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC3O15379 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 BX088651.1-201ENST00000540551 451 ntBASIC17.41■□□□□ 0.38
HDAC3O15379 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC3O15379 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC3O15379 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC3O15379 AP001412.1-201ENST00000608405 714 ntBASIC17.41■□□□□ 0.38
HDAC3O15379 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC3O15379 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HDAC3O15379 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HDAC3O15379 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC3O15379 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC3O15379 REXO1L11P-201ENST00000620964 1927 ntBASIC17.41■□□□□ 0.38
HDAC3O15379 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDAC3O15379 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HDAC3O15379 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC3O15379 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC3O15379 RPS2P55-201ENST00000397318 883 ntBASIC17.4■□□□□ 0.38
HDAC3O15379 AL355355.2-201ENST00000442321 338 ntBASIC17.4■□□□□ 0.38
HDAC3O15379 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC3O15379 AC107956.1-201ENST00000494359 873 ntBASIC17.4■□□□□ 0.38
HDAC3O15379 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.4■□□□□ 0.38
HDAC3O15379 CD99P1-205ENST00000527459 561 ntBASIC17.4■□□□□ 0.38
HDAC3O15379 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC3O15379 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC3O15379 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC3O15379 AC113410.3-201ENST00000623366 203 ntBASIC17.4■□□□□ 0.38
HDAC3O15379 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC3O15379 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms