Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.9■□□□□ 0.62
SOX1O00570 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.9■□□□□ 0.62
SOX1O00570 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.9■□□□□ 0.62
SOX1O00570 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX1O00570 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
SOX1O00570 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.9■□□□□ 0.62
SOX1O00570 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SOX1O00570 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX1O00570 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX1O00570 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX1O00570 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SOX1O00570 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX1O00570 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.9■□□□□ 0.62
SOX1O00570 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
SOX1O00570 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SOX1O00570 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.89■□□□□ 0.61
SOX1O00570 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SOX1O00570 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SOX1O00570 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.89■□□□□ 0.61
SOX1O00570 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.89■□□□□ 0.61
SOX1O00570 SPDYE11-202ENST00000450699 704 ntBASIC18.89■□□□□ 0.61
SOX1O00570 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.89■□□□□ 0.61
SOX1O00570 SPDYE9P-201ENST00000570642 692 ntBASIC18.89■□□□□ 0.61
SOX1O00570 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.89■□□□□ 0.61
SOX1O00570 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 AL158211.3-201ENST00000607385 239 ntBASIC18.89■□□□□ 0.61
SOX1O00570 AC017083.2-201ENST00000608069 979 ntBASIC18.89■□□□□ 0.61
SOX1O00570 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.89■□□□□ 0.61
SOX1O00570 SPDYE10P-202ENST00000612005 668 ntBASIC18.89■□□□□ 0.61
SOX1O00570 SPDYE8P-202ENST00000612377 668 ntBASIC18.89■□□□□ 0.61
SOX1O00570 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.89■□□□□ 0.61
SOX1O00570 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SOX1O00570 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SOX1O00570 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.89■□□□□ 0.61
SOX1O00570 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX1O00570 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.88■□□□□ 0.61
SOX1O00570 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.88■□□□□ 0.61
SOX1O00570 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 AL671277.1-201ENST00000429656 993 ntBASIC18.88■□□□□ 0.61
SOX1O00570 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
SOX1O00570 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.88■□□□□ 0.61
SOX1O00570 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.88■□□□□ 0.61
SOX1O00570 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.88■□□□□ 0.61
SOX1O00570 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.88■□□□□ 0.61
SOX1O00570 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.88■□□□□ 0.61
SOX1O00570 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SOX1O00570 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX1O00570 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX1O00570 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX1O00570 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX1O00570 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SOX1O00570 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX1O00570 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SOX1O00570 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.87■□□□□ 0.61
SOX1O00570 RBPMS2P1-201ENST00000437762 623 ntBASIC18.87■□□□□ 0.61
SOX1O00570 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.87■□□□□ 0.61
SOX1O00570 AC079140.1-201ENST00000508039 487 ntBASIC18.87■□□□□ 0.61
SOX1O00570 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.87■□□□□ 0.61
SOX1O00570 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.87■□□□□ 0.61
SOX1O00570 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.87■□□□□ 0.61
SOX1O00570 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX1O00570 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.87■□□□□ 0.61
SOX1O00570 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SOX1O00570 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX1O00570 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.87■□□□□ 0.61
SOX1O00570 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.87■□□□□ 0.61
SOX1O00570 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.87■□□□□ 0.61
SOX1O00570 AC099522.2-201ENST00000607001 744 ntBASIC18.87■□□□□ 0.61
SOX1O00570 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX1O00570 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SOX1O00570 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX1O00570 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
SOX1O00570 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms