Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 PRORSD1P-202ENST00000563365 2154 ntBASIC17.24■□□□□ 0.35
SLC28A1O00337 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A1O00337 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A1O00337 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 KRT18P65-201ENST00000439811 1286 ntBASIC17.24■□□□□ 0.35
SLC28A1O00337 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A1O00337 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A1O00337 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC28A1O00337 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A1O00337 GCSHP2-201ENST00000560971 527 ntBASIC17.24■□□□□ 0.35
SLC28A1O00337 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A1O00337 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A1O00337 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
SLC28A1O00337 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 PP12613-201ENST00000424958 2230 ntBASIC17.24■□□□□ 0.35
SLC28A1O00337 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A1O00337 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A1O00337 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC28A1O00337 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SLC28A1O00337 AL138966.2-201ENST00000621997 464 ntBASIC17.23■□□□□ 0.35
SLC28A1O00337 LINC01451-201ENST00000623792 534 ntBASIC17.23■□□□□ 0.35
SLC28A1O00337 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC28A1O00337 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 AC108860.2-201ENST00000562760 2183 ntBASIC17.23■□□□□ 0.35
SLC28A1O00337 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A1O00337 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC28A1O00337 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A1O00337 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SLC28A1O00337 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A1O00337 HLA-J-201ENST00000462773 1622 ntBASIC17.22■□□□□ 0.35
SLC28A1O00337 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A1O00337 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC28A1O00337 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC28A1O00337 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC28A1O00337 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 AC140113.3-201ENST00000605663 199 ntBASIC17.22■□□□□ 0.35
SLC28A1O00337 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 LINC00304-203ENST00000565008 1864 ntBASIC17.22■□□□□ 0.35
SLC28A1O00337 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC28A1O00337 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SLC28A1O00337 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC28A1O00337 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC28A1O00337 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SLC28A1O00337 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC28A1O00337 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC28A1O00337 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms