Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF11BO00300 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 AP003041.3-201ENST00000527151 707 ntBASIC16.56■□□□□ 0.24
TNFRSF11BO00300 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.56■□□□□ 0.24
TNFRSF11BO00300 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 LINC00304-203ENST00000565008 1864 ntBASIC16.55■□□□□ 0.24
TNFRSF11BO00300 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF11BO00300 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms